Post-doctoral Associate

Sook Hee Yoon
  (E-mail: yoonsh312 ''at'' snu "dot" ac ''dot'' kr)
  • Posdoctoral Associate, Division of Virology and Division of Veterinary Biotechnology, National Veterinary Research and Quarantine Service (2006 - 2008)
  • Posdoctoral Associate, Laboratory of Animal Systematics and Molecular Phylogenetics, Seoul National University (2003 - 2005)
  • Posdoctoral Associate, Laboratory of Animal Systematics, Sung Kyun Kwan University (2000 - 2002)
  • Ph.D in Molecular Phylogenetics, Seoul National University (2000)
  • M.Sc in Animal Systematics, Sung Kyun Kwan University (1991)
  • B.Sc in Biology, Sung Kyun Kwan University (1989)
Duration : 2009.01 ~
Current Position : Senior Research Engineer

Publication
1  Jihyun Yu, Bo-Hye Nam, Joon Yoon, Eun Bae Kim, Heebal Kim, Sook Hee Yoon. Tracing the spatio-temporal dynamics of endangered fin whales (Balaenoptera physalus) within baleen whale (Mysticeti) lineages: A mitogenomic perspective. Genetica. 2017. Accepted.
2  Jihyun Yu, Sojin Ahn, Kwondo Kim, Kelsey Caetano-Anolles, Chanho Lee, Jungsun Kang, Kyungjin Cho, Sook Hee Yoon, Dae-Kyung Kang, Heebal Kim. Comparative genome analysis of Lactobacillus plantarum GB-LP1 isolated from traditional Korean fermented food. Journal of Microbiology and Biotechnology. 2017. [LINK]
3  Soomin Jeon, Jaehoon Jung, Kwondo Kim, DongAhn Yoo, Chanho Lee, Jungsun Kang, Kyungjin Cho, Dae-Kyung Kang, Woori kwak, Sook Hee Yoon, Heebal Kim, Seoae Cho. Comparative genome analysis of Lactobacillus plantarum GB-LP3 provides candidates of survival-related genetic factors. Infection, Genetics and Evolution. 2017. [LINK]
4  Sook Hee Yoon, Jaemin Kim, Donghyun Shin, Seoae Cho, Woori Kwak, Hak-Kyo Lee, Kyoung-Do Park, Heebal Kim. Complete mitochondrial genome sequences of Korean native horse from Jeju Island: Uncovering the spatio-temporal dynamics. Molecular Biology Reports. 2017. [LINK]
5  Mengistie Taye, Jaemin Kim, Sook Hee Yoon, Wonseok Lee, Olivier Hanotte, Tadelle Dessie, Stephen Kemp, Okeyo Ally Mwai, Kelsey Caetano-Anolles, Seoae Cho, Sung Jong Oh, Hak-Kyo Lee and Heebal Kim. Whole genome scan reveals the genetic signature of African Ankole cattle breed and potential for higher quality beef. BMC Genetics. 2017. [LINK]
6  Woori Kwak, Kwondo Kim, Chul Lee, Chanho Lee, Jungsun Kang, Kyungjin Cho, Sook Hee Yoon, Dae-Kyung Kang, Heebal Kim, Jaeyoung Heo, Seoae Cho. Comparative analysis of the complete genome of Lactobacillus Plantarum GB-LP2 and potential candidate genes for host immune system enhancement. JMB. 2015. [LINK]
7  Taehyung Kwon, Sook Hee Yoon, Kyu-Won Kim, Kelsey Caetano-Anolles, Seoae Cho, Heebal Kim. Time-calibrated phylogenomics of the classical swine fever viruses: genome-wide Bayesian coalescent approach. 2015. PLoS ONE.
8  Jung Youn Park, Yong-Rock An, Naohisa Kanda, Chul-Min An, Hye Suck An, Jung-Ha Kang, Eun Mi Kim, Du-Hae An, Hojin Jung, Myunghee Joung, Myung Hum Park, Sook Hee Yoon, Bo-Young Lee, Taeheon Lee, Kyu-Won Kim, Won Cheoul Park, Dong Hyun Shin, Young Sub Lee, Jaemin Kim, Woori Kwak, Hyeon Jeong Kim, Young-Jun Kwon, Sunjin Moon, Yuseob Kim, David W Burt, Seoae Cho and Heebal Kim. Cetaceans evolution: insights from the genome sequences of common minke whales. BMC Genomics January 2015, 16:13 doi:10.1186/s12864-015-1213-1
9  Woori Kwak, Ki-Duk Song, Jae-Don Oh, Kang-Nyeong Heo, Jun-Heon Lee, Woon Kyu Lee, Sook Hee Yoon, Heebal Kim, Seoae Cho and Hak-Kyo Lee. Uncovering genomic features and maternal origin of Korean Native Chicken by whole genome sequencing. Plos One 2014. Accepted.
10  Sook Hee Yoon, Hyekwon Kim, Jaemin Kim, Hak-Kyo Lee, Bongkyun Park, Heebal Kim, 2013. Complete genome sequences of porcine reproductive and respiratory syndrome viruses: perspectives on their temporal and spatial dynamics. Molecular Biology Reports. 40(12): 6843-6853 [SCI]
11  Sook Hee Yoon, Hyekwon Kim, Bongkyun Park, Heebal Kim, 2012. Tracing the genetic history of porcine reproductive and respiratory syndrome viruses derived from the complete ORF 5-7 sequences: A Bayesian coalescent approach. Arch. Virol. 157:2143-2151 [SCI]
12  Sook Hee Yoon, Kwang-Nyeong Lee, Jong-Hyeon Park, Heebal Kim, 2011. Molecular epidemiology of foot-and-mouth disease virus serotypes A and O with emphasis on Korean isolates: temporal and spatial dynamics. Arch. Virol. 156:817-826 [SCI]
13  Sook Hee Yoon, Woncheoul Park, Donald P. King, and Heebal Kim, 2011. Phylogenomics and molecular evolution of foot-and-mouth disease virus. Molecules and Cells. 31:413-421 [SCI]
14  Dong-Jun An, Wooseog Jeong, Hye-Young Jeoung, Sook Hee Yoon, Hyun-Jeong Kim, Jee-Yong Park and Bong-Kyun Park, 2011. Phylogenetic analysis of feline panleukopenia virus (FPLV) strains in Korean cats. Research in Veterinary Science. 90:163-167 [SCI]
15  Xiaoping Li, Sang-Wook Kim, Kyoung-Tag Do, You-Kyoung Ha, Yun-Mi Lee, Sook Hee Yoon, Heebal Kim, Jong-Joo Kim, Bong-Hwan Choi, Kwan-Suk Kim, 2011. Analyses of porcine public SNPs in coding-gene regions by re-sequencing and phenotypic association studies. Mol. Biol. Rep. 38: 3805?3820 [SCI]
16  Kwang-Nyeong Lee, Tung Nguyen, Su-Mi Kim, Jong-Hyeon Park, Hoa T. Do, Huong T.Ngo, Duong T. Mai, Seo-Yong Lee, Cam V. Nguyen, Sook Hee Yoon, Chang-Hee Kweon, In-Soo Cho, Heebal Kim, 2011. Direct typing and molecular evolutionary analysis of field samples of foot-and-mouth disease virus collected in Vietnam between 2006 and 2007. Veterinary Microbiology. 147:244-252 [SCI]
17  Yoon, S. H., W. Jeong, D.-J. An, C. Choi, and J.-Y. Kim, 2010. A molecular phylogeny of the benign Theileria parasites based on the major piroplasm surface protein (MPSP) gene sequences. Parasitology. 137: 241-249 [SCI] (co-first)
18  Yoon, S.H., D.-J. An, W. Jeong, H.-J. Kim, B.-K. Park, 2010. Genetic analysis of Akabane virus isolates from cattle in Korea. Vet. Microbiol. 140: 49-55 [SCI] (co-first)
19  Jun-Sang Ham, Seung-Gyu Lee, Seok-Geun Jeong, Mi-Hwa Oh, Dong-Hun Kim, Taehun Lee, Bo-Young Lee, Sook Hee Yoon, Heebal Kim, 2010. Powerful usage of phylogenetically diverse Staphylococcus aureus control strains for detecting multidrug resistance genes in transcriptomics studies. Molecules and Cells. 30:71-76 [SCI]
20  An, D.-J., W. Jeong, S.H. Yoon, H.-Y. Jeong, H.-J. Kim, and B.-K. Park, 2010. Genetic analysis of canine group 2 coronavirus in Korean dogs. Vet. Microbiol. 141:46-52 [SCI]
21  Yoon, S. H., W. Jeong, H.-J. Kim, C. Choi, and D.-J. An, 2009. Molecular insights into the phylogeny of canine parvovirus 2 (CPV-2) with emphasis on Korean isolates: A Bayesian approach. Arch. Virol. 154: 1353-1360. [SCI]
22  Jae, Y.C., S.-J. Kwon, J.Y. Roh, T.J. Yang, S.H. Yoon, H. Kim, M.S. Li, B.-S. Park, S.-D. Woo, B.R. Jin, Y. Kim, Y.H. Je. 2009. Sequence and gene organization of 24 circles from the Cotesia plutellae bracovirus genome. Arch. Virol. 154: 1313-1327. [SCI]
23  An, D.-J., W. Jeong, H.-Y. Jeoung, S.H. Yoon, H.-J. Kim, and B.-K. Park, 2009. Encephalomyocarditis in Korea: Serological survey in pigs and phylogenetic analysis of two historical isolates. Vet. Microbiol. 137: 37-44 [SCI]


Soo-Jin Kim
   (E-mail: kim.soojin ''at'' outlook ''dot'' com)
  • Ph.D. in Bioinformatics, Seoul National University
  • B.S. in Multimedia Science and Bioinformatics, Sookmyung Women's University

Duration : 2014.3 ~
Current Position : Post-doctoral Associate

Publication
1  S.-J. Kim, J.-W. Ha, and B.-T. Zhang. Bayesian evolutionary hypergraph learning for predicting cancer clinical outcomes. 2014. Journal of Biomedical Informatics.
2  S.-J. Kim, J.-W. Ha, and B.-T. Zhang. Constructing higher-order miRNA-mRNA interaction networks in prostate cancer via hypergraph-based learning. 2013. BMC Systems Biology.7:47.
3  J.-G. Joung, S.-J. Kim, S.-Y. Shin, and B.-T. Zhang. A probabilistic coevolutionary biclustering algorithm for discovering coherent patterns in gene e-pression dataset. 2012. BMC Bioinformatics.13(Suppl 17):S12.
4  S. Kim, S.-Y. Shin, I.-H. Lee, S.-J. Kim, R. Sriram, and B.-T. Zhang. PIE: an online prediction system for protein-protein interactions from text. 2008. Nucleic Acids Research.36, W411-W415.
5  J.-G. Joung, K.-B. Hwang, J.-W. Nam, S.-J. Kim, and B.-T. Zhang.Discovery of microRNA-mRNA modules via population-based probabilistic learning. 2007. Bioinformatics. 23(9):1141-1147.


Kelsey Caetano-Anolles
   (E-mail: kelseyca ''at'' gmail ''dot'' com)
  • Ph.D in Animal Sciences, University of Illinois at Urbana-Champaign (2016)
  • M.S. in Forensic Psychology, The Chicago School of Professional Psychology (2013)
  • B.Sc in Psychology, University of Illinois at Urbana-Champaign (2011)
  • A.A.S. with honors in Psychology, Parkland College (2011)

Duration : 2016.03 ~
Current Position : Post-doctoral Associate

Publi cation
1  Mengistie Taye, Wonseok Lee, Kelsey Caetano-Anolles, Tadelle Dessie, Olivier Hanotte, Okeyo Ally Mwai, Stephen Kemp, Seoae Cho, Sung Jong Oh, Hak-Kyo Lee, Heebal Kim. Whole genome detection of signature of positive selection in African cattle reveals selection for thermotolerance. Animal Science Journal. 2017. [LINK]
2  Jihyun Yu, Sojin Ahn, Kwondo Kim, Kelsey Caetano-Anolles, Chanho Lee, Jungsun Kang, Kyungjin Cho, Sook Hee Yoon, Dae-Kyung Kang, Heebal Kim. Comparative genome analysis of Lactobacillus plantarum GB-LP1 isolated from traditional Korean fermented food. Journal of Microbiology and Biotechnology. 2017. [LINK]
3  Bo-Hye Nam, Woori Kwak, Young-Ok Kim, Dong-Gyun Kim, Hee Jeong Kong, Woo-Jin Kim, Jeong-Ha Kang, Jung Youn Park, Cheul Min An, Ji-Young Moon, Choul Ji Park, Jae Woong Yu, Joon Yoon, Minseok Seo, Kwondo Kim, Duk Kyung Kim, SaetByeol Lee, Samsun Sung, Chul Lee, Younhee Shin, Myunghee Jung, Byeong-Chul Kang, Shin Ga-hee, Sojeong Ka, Kelsey Caetano-Anolles, Seoae Cho, Heebal Kim. Genome sequence of pacific abalone (Haliotis discus hannai): the first draft genome in family Haliotidae. Gigascience. 2017.
4  Mengistie Taye, Jaemin Kim, Sook Hee Yoon, Wonseok Lee, Olivier Hanotte, Tadelle Dessie, Stephen Kemp, Okeyo Ally Mwai, Kelsey Caetano-Anolles, Seoae Cho, Sung Jong Oh, Hak-Kyo Lee and Heebal Kim. Whole genome scan reveals the genetic signature of African Ankole cattle breed and potential for higher quality beef. BMC Genetics. 2017. [LINK]
5  Sojin Ahn, Han Young Chung, Sooyeon Lim, Kwondo Kim, Suyeon Kim, Eun Jung Na, Kelsey Caetano-Anolles, Ju-Hoon Lee, Sangryeol Ryu, Sang Ho Choi and Heebal Kim. Complete genome of Vibrio parahaemolyticus FORC014 isolated from the toothfish. 2016. Gut Pathogens. [LINK]